Initial work on basal tubule character
Merge remote-tracking branch 'origin/develop' into develop-basal-character
Merge remote-tracking branch 'origin/develop' into develop-basal-character
Merge remote-tracking branch 'origin/develop' into develop-basal-character
Merge remote-tracking branch 'origin/develop' into develop-basal-character
Merge remote-tracking branch 'origin/develop' into develop-basal-character
Merge remote-tracking branch 'origin/develop-avatolsystem' into develop-basal-character
Updated basal character module interface
Changed interface to convert polygons to masks
Preprocess module for AVATOL system
Includes test examples now
Parse input file module added
Added write log function
Fixed struct bug
Print statements
Invoke system stub
Installation script stub
Postprocess HC-Search results
Updated AVATOL system invocation
Improved postprocess interface