in parsemutations posttreatment, also calculate the (future) generation at which a focal individual has the highest number of offsprings (might be more relevant that the total reproductive success for the evolutionary potential of cooperation)
in commit b43fa1554bc1bb97f60a6ea79c5cead0a724a5ac, forgot to also modify class ae_individual_X11
Make option -g work in extract
fix MAJOR bug in isolation of GUs: because of using break instead of continue, when a protein was 'skipped' from phenotype calculation, all the follwing proteins were also skipped.
in aevol_create, rename option -g into -c (load chromosome from a file), and add an option -p to load plasmid from a file