Merge pull request #903 from melissalinkert/updater

Fix upgrade checker to delete loci_tools.jar when appropriate
Update auto-generated documentation

Repository: openmicroscopy/bioformats
Already up-to-date.

Generated by BIOFORMATS-5.0-latest-docs-autogen#162 (http://ci.openmicroscopy.org/job/BIOFORMATS-5.0-latest-docs-autogen/162/)