create loop that chunks and places output in a holder.
par loop functions
added slurm script
correct paths
loop including phylor works and is at about 16 seconds per run, most of that time is in the PD function, starting to bring in ben holt's pmatsim function to compute betasim, need to break out his functions and compute the total cell matrix just once at the top and then supply that as an argument to pmatsim
betasim integrated with the rest of the analysis
comm.d fails
added testing data