Options for setting the random seed.
Section about GUI behaviour.
Entangled graphs are not yet supported in the power calculations.
It is checked if matrices are correlation matrices and only these can be loaded.
Function to force matrices to correlation matrices.
Only correlation matrices can be loaded. (If another quadratic matrix is entered by the user, it is asked whether this matrix should be forced to be symmetric and converted from a possible covariance matrix to a correlation matrix.)
Fixed: For certain parameter combinations gMCP could stop early complaining about a missing 'test' parameter.
Added check for correlation to function gMCP.
Removing unused Class.
The parameters 'cr' and 'sigma' in function 'calcPower' were renamed into 'corr.test' and 'corr.sim' respectively to further clarify that both are correlation matrices, the first used for the test (this matrix may contain NAs if the full correlation is not known for the test) and the second one for the simulation (which can not contain NAs and may also differ from the first one if power under misspecification is investigated). For compatibility the old function calls actually still work, but are discouraged.
Removing sample size calculations from menu for now.
Merge branch 'pre-R3'