Sphinxification-June2014

More sphinx work on the theme, linking and generation. custom method summary generator directive.

Still needs tweaking here and there so everything is interlinked... 
Embroidertheme API Preview at this point. 
![embroidertheme_preview](https://cloud.githubusercontent.com/assets/4668356/3421087/9a19d40c-fed7-11e3-934d-4caff63ae7e7.png)