Refactor DeBruijn graph and compatibleSets data structure
preprocessing DeBruijn datastructure and unittest
Refactoring DB graph
Update jar files
Refactoring import statements
Refactoring package structures, more align with original BEAST structures
add missing jar files
Merged from developSW, solved conflict
Merge correctly this time I think
DBG Likelihood, test count and lengthDiff
Implemeneted Path, PathSets, and likelihood caluculation(wrong result)
implement revcomp set
merge from developSW
Setup basic datastructure for tdmcmc
SuperBeast**Model is identical(almost, except constructor) to original BEAST code now
Changed a few private(final) to protected in SuperBeastTreeModel.java
I think these are essential changes for Transdimensional class
implemented revcomp in likelihood calculation
merged from devolopSW
fixed minor importing errors from merging