Added bam outstream option
Merge branch 'master' of https://github.com/psudmant/stream_read_pair

Conflicts:
	stream_sort_pairs.py
ugly merge fix
re-added line endings
Merge branch 'master' of https://github.com/bnelsj/stream_read_pair
trying to fix line ending issue
Merge branch 'master' of https://github.com/psudmant/stream_read_pair
Sample 100 pairs at each position to fix insert size bias
Merge branch 'master' of https://github.com/bnelsj/stream_read_pair