[BAM]Fix: Fixed duplicate check
[BAM]Implement: Added hardclip function for softclipped bases
[BAM]Implement: Added hardclip function for softclipped bases
[BAM]Fixes: Corrected some bugs. Added duplicated filter to recalibration tool
[BAM]Implement: Added scripts for statistics graphical output
[BAM]Fix: Fixed a bug in charts generation, total time index was 1 instead of 0