Revert "ignore .project and .classpath files and .settings folders"

This reverts commit 331ff98d720a7a1ae1a45c1c9d018fd743b3eed0.
Revert "remove .project, .classpath files and .settings folders from repository"

This reverts commit c05daa593605c64b0d7fe57aea5c5635316d0316.
Disable failing HibernateConsoleTests (see JBIDE-16261)