Made minimal read depth optional for comparison of VCFs.
Added test set to .gitignore
Added test dir to test R-scripts (test data omitted)
Refactored r-scripts
Merge pull request #18 from mdijkstra/master

Refactored R-scripts
Further polished chi correction script.
In previous version of this script, the bins of the sample of interest (soi) were corrected based on variation in _control samples combined with soi_.
Now the variation is determined only in control samples.
Rename according to NIPT story
Rename according to story
Polished script
fixes chi correction.R
FunctionNames instead of function.names
Merge branch 'master' of https://github.com/molgenis/ngs-utils

Regular pull from blessed master
Bug fix for crash when coloring jobs by queue.
fixes
Refactored determine_predictor script(s).
Merge pull request #19 from mdijkstra/master

Refactored R-scripts
Merge pull request #20 from pneerincx/master

Improved vcf-compare and ctop
Changed permissions for rsync destination: removed write permission for group.
Fixed redundant warnings bug.
Added BED file for Agilent_SureSelect_Inherited_Disease_V1_S0684402 capturing kit.