[FEATURE] extend PeptideHit and increase conformity with mzIdentML/mzTab
[FEATURE] added struct to store protein information
[FEATURE] Introduced proper peptide evidence support for some handlers
[FEATURE] more PeptideEvidence support
[FIX] updated test files with changed order of protein ids
[FIX] fixed parsing of peptide evidence in XTandemXMLFile
[FIX] fix reporting of AABefore/After from OMSSA results
[FIX, TEST] fixed test failing by reordering of protein accessions
[FIX, TEST] fixed ProteinInference test failing because of reordering of
PHs
[FIX] forgot to export PeptideHits without peptide evidence
[FIX] only return non-empty accession in PeptideHit. Adapted and fixed some tests
[NOP] made constant for AA before N- or after C-term unique
[FIX] fixed empty protein references in OpenSWATH and uncrustified
branch
[FIX] removed commented out code, extra includes
[FIX, PYOPENMS] adapted pxds to match updated interfaces
[FIX, TEST] pyOpenMS fixes
Merge pull request #1048 from timosachsenberg/feature/PeptideHit_ProteinLocations

Feature/peptide hit protein locations