Use correct path to do attribute check. Refs #777
update to newer JAR to fix Java 8 error. Refs #681
eclipse config, update test to be parsed by Java 8
update copyright date
update Reactome download script. Apparently if you have an invalid organism, the script fails.
add ant
Merge pull request #805 from intermine/i777

Use correct path to do attribute check. Refs #777
add missing integration key
temporarily remove thalemine until restricted access issue is resolved. Refs #772
Removed some unnecessary imports.
Add preconfiguration for wso2 subject claims.
Documentation fixes.
correct name of OBO file
don't throw exception when encountering an ontology term without a name. give it the name UNKNOWN and log the error. Refs #830
accept spaces and underscores in filenames. Refs #829
update all keys. Refs #832
Merge pull request #833 from intermine/i830

don't throw exception when encountering an ontology term without a name....
Ignore artefacts of the script to download and configure tomcat.
Update script so that is works on Macs
Some safety and sanity changes for the setup script.