Migrate vtk5 back from homebrew-versions
vtk: use patch DSL
Mira: upgrade to 4.0.2.

The Boost libraries aren't discovered unless they are passed to make.

Closes #968.
Upgrade asl to v20140617.

Closes #978.
version 6.7.1

Closes #972.
delly 0.5.5

Closes #974.
sratoolkit: version 2.3.5-2

Closes #965.
Ipopt: upgrade to 3.11.8
Scotch: build shared libs and run tests.

Include a patch to fix the ptcheck tests and to correct an omission
in the tests Makefile.
asl 20140618

Closes #981.
New formula: getdp 2.4.3

Closes #945.
vecLibFort 0.2: new formula

Closes #765.
Velvet: fix options for command-line arguments.

Closes #985.
Velvet: fix default CATEGORIES value.

Closes #986.
tisean: new formula

Closes #980.
picard-tools: upgrade to 1.115

Closes #982.
Colpack: option to build against libc++
Adol-C: upgrade to 2.5.0.

Closes #793.
Install LUSOL headers in lp_solve

Closes #657.
Getdp: Fix Gmsh lib destination.