replace annotated-log with prefix-and-tee-output, which explicitly takes a file name for stdout and stderr
make bin/annotate-log autoflush
updated workflow hub to print to log files in a way that will flush immediately
do not set the "-n N" option with OpenLava
rusage in openlava uses colon as a delimiter instead of comma
openlava specific changes; colon as a delimiter for rusage, disable -n option
any() wasn't getting imported for List::MoreUtils

Lead to an error: Can't locate object method "any" via package "Regexp"
because of the old indirect object syntax
Try to load commands via 'use' and namespace

The bacterial gene-prediction pipeline was failing because it relied on the
pervious namespace behavior.
spelling: s/definations/definitions/
make error message more detailed
switch order of namespace/use command checks

Conflict was with a spelling correction on an old comment that was removed.

Conflicts:
	lib/Workflow/OperationType/Command.pm
updated ur submodule to a051290
removed hardcoded reference to TGI statsd url and replaced with ENV or localhost
updated ur submodule to 6926bc8
remove "empty" README
Revert 'remove "empty" README'

This reverts commit d16afb5a5a2553ccf094ee82d407541a55d58285.
Reinstate 'remove "empty" README'

This reverts commit bd76a091f7c6d23592e82c4d72b1af5167fd5166.
changed env variable name for statsd
updated ur submodule to 16bcd51
Test commit to see if hook to github is working