thread suport for BWA
Merge branch 'master' of https://github.com/chipster/chipster.git
Add lightweight version of R-3.0 runtime
Added plot-annoheatmap.R and modified R-3 tools dir
Update bedtools in vm
EdgeR-multivariate.R and ngs-dea-edger-RNA.R to R-3
Made new R-folder in common and moved bed-utils.R there.
Merge branch 'master' into data_beta