Support nested directories.
Fix minor inconsistencies.
Fixed sorting for directories.
Fix parsing bug caused by bad formatting of tags,
Fix whitespace.
Deleted trailing whitespace.
Add source code to function hash.
Add syntax highlighting.
Fix linkages, these files don't exist, they're minified.
Fix bug caused by target attribute in anchor tags.
Todo
Link clean up
Merge branch 'devel'
Updated Copyrights and Merged changes from Mak.