COMP: Fixed error in DCMTK pathing
        
The update to DCMTK to match the version from Slicer.




git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@242 3db2834d-1276-0410-a171-f2f48b2634cc
BUG: Builds DCMTK in SuperBuild_DTIPrep before adding BRAINSTools

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@243 3db2834d-1276-0410-a171-f2f48b2634cc
BUG: Path to executables was found only after reconfiguring the project

When configuring the project a first time, the path to the executables used for the installation and the packaging were not set properly. CMake was trying to fin the executable but those were not yet built. One had to compile the code first, and then configure the project again to set the paths properly



git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@244 3db2834d-1276-0410-a171-f2f48b2634cc
STYLE: Useless ITK deprecated define removed.

The ITK_EXPORT define was set to nothing and had no
known remaining purpose.  It was removed to make the
over all code easier to understand.  There was,
understandably, a bit of confusion about the
need for this being pervasive in the code.

It is currently backwards compatible to have
this in code, but at some future point it will
be removed.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@245 3db2834d-1276-0410-a171-f2f48b2634cc
COMP: Syncronized and fixed bug in DCMTK path finding.

The cmake find package required the NO_MODULE option when specifying a system version
of DCMTK built outside of ITK.  This was needed to allow sharing a common DCMTK across
various tools.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@246 3db2834d-1276-0410-a171-f2f48b2634cc
COMP: UKF via BRAINSTools had bugs that needed resolving in the build process.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@247 3db2834d-1276-0410-a171-f2f48b2634cc
COMP: Remove warning about trigraphs caused by ill formed comment.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@248 3db2834d-1276-0410-a171-f2f48b2634cc
COMP: Ensure that all sub-packages are updated to latest version

Ensure that all sub-packages compile with newer version of SlicerExecutionModel
and are compliant with the more strict future version of ITKv4.5 that
has explicit single and double presicion transforms.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@249 3db2834d-1276-0410-a171-f2f48b2634cc
BUG: Bug in DTIProcess required update.

git-svn-id: https://www.nitrc.org/svn/dtiprep/trunk@250 3db2834d-1276-0410-a171-f2f48b2634cc
BUG: Debugging DTIPrep returning non-zero status even when successful.
ENH: BRAINSTools to include fixed version of UKF.

UKF was writing vtk files with incorrect orientations
of the tensors this was fixed and pull requests generated.
ENH: Update BRAINSTools with BCD fixes.