Add aliases to characterizations and replicate. Remove them from currently unused software and file_relationship. Bump version numbers as the default will not be there for existing items, though missing aliases are handled.
Fix mixin conflicts.
Improved search and made small change to indexing script
Merge branch 'more-aliases'
No longer use my branch of pyramid.
Move d3 to vendor, hopefully fix github language stats.
Basic stats logging to response header. This can be logged by apache then pushed into something like graphite.
minox code fix
Changes to the indexing script and included documents to be indexed in ElasticSearch
Added 3xFLAG, DsRed, TRE, and T2A to the tags enum in construct.json. #645
Minor fix to the indexing script
Merge pull request #14 from ENCODE-DCC/stats

Basic stats logging to response header. This can be logged by apache the...
Merge pull request #11 from ENCODE-DCC/645

Added 3xFLAG, DsRed, TRE, and T2A to the tags enum in construct.json. #645
Merge pull request #13 from ENCODE-DCC/search_improvements

Search improvements
Elasticsearch timing hook.
This measures the requests duration, rather than ES's 'took' value.
Fix mod_wsgi queue time stats.
apache config tweaks

See https://groups.google.com/d/msg/modwsgi/Bq96LkL1JgY/ZaL5nIYL8IwJ
Make collection limit work with collection_source=database
Remove stray pdb.set_trace()
Add access_keys and files to es-index-data script.