Starting document describing HMM issues
in hmm.md, - -> ndash
A bit more in the hmm.md doc
A bit more text in hmm.md
hmm.md: Comment on what we need to keep track of, regarding the X chromosome
hmm.md: a bit more regarding a recommendation
hmm.md: treatment of genotype data for X chr
hmm.md: crosses with >2 founders
Merge branch 'master' into editdocs
Merge branch 'master' into editdocs
hmm.md: Add link re MAGIC lines