Averaging for contigs to compare to Brian's
Flailing around to try and get Brian's normalisation

getting rma to work on agilent data is less easy than
I'd hoped...
Trying to get RMA working on my Agilent data

It isn't trivial to get agilent data into a form
that can RMAed in bioconductor because the RMA
stuff I can find is all for Affy objects which I
can't shove my data into and the other methods
throw errors so I'm going to try some agilent related
packages for a bit