Correct customProfiles.cs execution.

This removes a duplicate and erroneous attempt to load the customProfiles.cs script.  Also added additional commentary to note that this file is the default save location when using the Gui Editor to create GuiProfiles.
Also fixes a problem where the Empty Template was not loading customProfiles.cs
Merge pull request #322 from thecelloman/fixcustomprofiles

Correct customProfiles.cs execution.