Converted to use CMake
adopting for minc-toolkit
modifying to build withing minc-toolkit
Changing config.h.cmake to be more compatible with autoconf
Force the compilation to build static libraries.

The linking using dynamic libraries does not work yet.
Making shure that unique variable names are used for configuring
Merge branch 'develop' of git://github.com/BIC-MNI/mni_autoreg into develop
Added installing missing binaries
Added installing mincblur
Converting regression tests to CMAKE
Added couple of tests for mintracc and param2xfm
Updated to use LIBMINC instead of MINC
replaced MINC2 to LIBMINC
fixed tests
updates to support libMinctracc
not sure
Working, but should not run more than once (globals not cleared). This is the last commit before I start really rewriting.
libminctracc support
Merge branch 'master' of /Volumes/robbmp/compiling/minc-toolkit/mni_autoreg

Conflicts:
	minctracc/CMakeLists.txt
	minctracc/Include/libminctracc.h
	minctracc/Include/minctracc.h
	minctracc/Main/globaldefs.h
	minctracc/Main/minctracclib.c
updates