contrib_Bioinfo_easyconfigs_by_Cedric

Signed-off-by: Cedric Laczny <cedric.laczny@uni.lu>
fixed tabs

Signed-off-by: Cedric Laczny <cedric.laczny@uni.lu>
Integrated suggestions about removing the patch, dependency testing in the easyblock and formatting

Signed-off-by: Cedric Laczny <cedric.laczny@uni.lu>
removed oases due to complications

Signed-off-by: Cedric Laczny <cedric.laczny@uni.lu>
fixed tabs

Signed-off-by: Cedric Laczny <cedric.laczny@uni.lu>
Merge branch 'contrib_Bioinfo_easyconfigs_by_Cedric' of github.com:claczny/easybuild-easyconfigs into contrib_Bioinfo_easyconfigs_by_Cedric

Conflicts:
	setup.py
get rid of patch for Tophat, --with-bam option is doing what it should be doing so no patch required
get rid of unused Cufflinks patch
Merge pull request #1 from boegel/contrib_Bioinfo_easyconfigs_by_Cedric

minor cleanup in Cufflinks and Tophat easyconfigs (get rid of patches)
Merge branch 'develop' into contrib_Bioinfo_easyconfigs_by_Cedric
Merge pull request #2 from boegel/contrib_Bioinfo_easyconfigs_by_Cedric

sync with develop
Merge pull request #52 from claczny/contrib_Bioinfo_easyconfigs_by_Cedric

Cufflinks, TopHat easyconfig contributions