Work in progress for VB-1865 and other performance enhancements.
Merge branch 'master' into future_development

April 2013 release merge update
Conflicts:
	sites/all/modules/custom/xgrid/tempFile
Merge branch 'master' into future_development
removed debugging text and bolded suggestion
readded search indexes and schema
Backed up blast work - need to restore bender.
sql dump backups
Merge branch 'future_development' of github.com:asheehan/VectorBase into future_development
VB-1865 Part of improving blast in general.

Added better feedback to status dialog after a query submit.
Slightly improved some query performance in the gff file
generation step.
Added timer logging to the gff file generation step (turned off
upon committing).
VB-1781 Search updates.
VB-1957 New popbio js and css from Bob for Pre
VB-1898 Commit ir/mito code for merge purposes.
Merge branch 'future_development' of https://github.com/asheehan/VectorBase into release_candidate

Conflicts:
	includes/search/schema.xml
	sites/all/modules/added/apachesolr/apachesolr_search.module
VB-1957 Another minor update.
VB-1957 One last popbio committ from Bob.
VB-1823 CVBrowser update.
VB-1957 Some PopBio tweaks.
VB-1898 Last tweaks to get IRBase into module.
VB-1963 New dataset format with organism name.

Format is: Peptides, [organism], [strain], [geneset]
VB-1906 Blast download performance improvements.