start adding status update code to design creation
add species when creating a design attempt record
add new script to parse the log file of a create-multiple-design.pl run and find failed attempts, it then outputs a new design parameter file for all the failed attempts for the next attempt
takes a list of gene names and outputs a design parameter file, warns if design targets for a gene do not exist and also does not output design targets for genes which already have designs
wip, script for automatically working out new design parameters for failed designs
update constant variables pointing to locations of software we need and config files
typos, missed semi-colons
perlcritic issues
use our not my for constant variables
remove tests setting a false path to primer3 program, the way the path is set now makes it difficult to force this error
when updating design_attempt record first check that the persist attribute exists before checking if its true, otherwise single step commands will not work
do not check for thrown errors when retrieving exon, just the existance of a exon object
we are throwing more specific errors now, update tests to reflect this