Merge pull request #3 from jeffschulte/master

stuff
z
z
Merge pull request #4 from jeffschulte/master

Latest protein.cpp and showatp.py
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data push
data??
removing bad data
Renes backlogged stuff
ignore certain boring files in git
git should ignore "protein" executable
modified dat files
Merge branch 'master' of github.com:renezeto/protein

Conflicts:
	.DS_Store
	membrane.dat
	protein.dSYM/Contents/Resources/DWARF/protein
Merge https://github.com/jeffschulte/protein

Conflicts:
	protein.pl
remove automatically generated files
Merge /home/jeffschulte/protein
added cell wall randomizer
Added the random cell walls, the caps on them dont work yet.  Takes forever too.  Sigh.