Needed to remove dependencies in Portal
Change versions numbers for the 0.13.6.2 hotfix
First pass, looks like there is somethign wrong with mappedFiles as well.
Updates for meeting
Initial implementation of BasicDecider using new web service resource.

Note that this does not handle check-wf-accessions yet.
Working BasicDecider with additional tests.

Tested against the BamQCDecider against COBB% and the identified test from Pull request fallout.
Added better toString methods in some Hibernate objects
Added interactive to the Metadata plugin
Started adding the batch metadata injection plugin
Merge branch 'develop' into feature/BatchInject
Adding documentation for the BasicDecider to both nanoc sources, once for the web service resource we needed to create, and once for the logic of the BasicDecider.
Fix up test
Preliminary implementation of the new field along with documentation.
Fix up all studies headers to match current implementation
Working fix, need better explanation of why this works.
added tests to the MetadataTest class for the new prompting methods.
Revert unnecessary change
Fix for work on SEQWARE-1434
Add fix for SEQWARE-1444, needs tests.
Fixes for SEQWARE-1444 and associated tests.