first commit
Updated to refer to all the different modes of groopm
Added lots of functionality. mainly to the parser objects
moved cmd code over here to make things make more sense?
finally have basic sam parsing working. Made a few shuffles. Still basically porting over from MeSSY
Make life easier wiht this mofo
Added history to the interactive shell
Small bug fix, now it re-raises the except
Added contig parser
Added another pyc
Added AUX parser
Added bins table to the db
Ported across the cluster code from MeSSY. This led to a number of
style updates. Project is coming together...
Added the last of the "true" MeSSY code.
Added the messom code to this file. Not funcitonal as yet...
More shuffles and cleaning. Added metadata storeage to the DB
Starting to come together
Still porting bits n bobs
Finished first round of data IO deva nd testing. YaY!
Unit tests for the mstore module