DOCS-1476: breaking resolution of internal links and improved build cleanup
theme: minor class name change
minor: making references consistent
DOCS-1449: reference display modification
command descriptions for four include files

Signed-off-by: Sam Kleinman <samk@10gen.com>
css note color to yellow

Signed-off-by: Sam Kleinman <samk@10gen.com>
DOCS-1449: moving commands to distinct table of contents pages
update command descriptions

Signed-off-by: Sam Kleinman <samk@10gen.com>
DOCS-1449 additional updates to command descriptions
build: improve dependency detection for composite pages
build: minor message modifying
DOCS-1449 display editing