Removed old containers module.
Removed singleton for ReadContainer. Removed loading CDS data while loading read alignments. Added helper methods in Read.
Added ReadContainer unit test.
Cleaning up singleton traces in the remaining code.
Separated CDS loading into two steps. Instead of loading everything in populate_from_aln_file, now there is second method to envoke and determine CDSs.
Updated container loading method.
Added populate method that fetches all the records reported in read alignments.
Maintenance (comments, renaming)
Prettying the code.
Updated container populating example to new containers and mock data.
Tests for containter API consistency and functionality.
Added tests for container API consistency and some of the functionality.
Merge branch 'remove_singleton' of https://github.com/abulovic/binner into remove_singleton
Adapted Solver and snippet to run solver to new containers.
Catching Location Parsing Exception
Unittest works with new containers.
Removed some output to stdout.
Read active status. Read deactivated once declared as potential host.
Not loading deactivated reads.
Updated for new containers.