Merge branch 'release/0.1.0'
organize/rename modules within lib
organize Perl and R scripts within bin
update modules being used in Perl scripts in bin
Merge branch 'feature/organize-lib-bin' into develop
Correct ->chromosome to ->_chromosome
Fix call to flanking coverage calculator
Fix database path
Change input files for adding coverage to db
Create coverage table in DB; Update DB path
Update script for troubleshooting coverage DB
Add sample workflow
Build coverageDB between IDing SNPs and getting flanking coverage
Build coverageDB in custom output directory
Cleanup finished TODOs
update sample workflow
Add filtering step to sample workflow
Add TODOs
Move coverageDB creation to subroutine
Allow nogap_cov to be NULL/undef