[sci-chemistry/nMOLDYN] Add to overlay

Package-Manager: portage-2.2.0_alpha179
[sci-chemistry/nMOLDYN] Update deps

Package-Manager: portage-2.2.0_alpha179
Mangling of the sources of sci-chemistry/freeon reduced, both for 2012.05.03, and for 9999.
Version of bigdft bumped to 1.7_pre24, moved from sci-libs to sci-physics. No longer used as a library by sci-physics/abinit. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as used upstream.
media-gfx/librecad: Cleanup and apply patch from bug #473388

Package-Manager: portage-2.2.01.22013-prefix
RepoMan-Options: --force
Renamed ebuild to conform with Gentoo Ebuild Naming Convention (TM).

http://devmanual.gentoo.org/ebuild-writing/file-format/

Package-Manager: portage-2.2.0_alpha180
Fixed bug in jabref ebuild.

Package-Manager: portage-2.2.0_alpha180
Abinit & friends upgraded to sci-physics/abinit-7.2.2. BigDFT moved from sci-libs to sci-physics, sci-physics/abinit uses sci-libs/bigdft-abi instead. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as mostly used upstream. Old files cleaned up.
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

Trying to commit a complex change of sci-physics/abinit and its libraries, I took some
time to put everything in pace so I have to pull some updates before puhing my work. Something
I do not fully understand is happening. If it breaks things I will try to clean up, as soon as
I understand the situation.
Don't let openmpi override malloc, works around sandbox issue in #462602

Package-Manager: portage-2.1.11.62
Version of bigdft bumped to 1.7_pre24, moved from sci-libs to sci-physics. No longer used as a library by sci-physics/abinit. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as used upstream.
Abinit & friends upgraded to sci-physics/abinit-7.2.2. BigDFT moved from sci-libs to sci-physics, sci-physics/abinit uses sci-libs/bigdft-abi instead. Usage of LIBDIR/finclude abandoned in favour of /usr/include, as mostly used upstream. Old files cleaned up.
sci-chemistry/talosn: New package

Package-Manager: portage-2.2.0_alpha180
sci-chemistry/mics: New package

Package-Manager: portage-2.2.0_alpha180
sci-chemistry/modeller: Fix broken symlink, #473680

Package-Manager: portage-2.2.0_alpha180
sci-chemistry/talosn: drop upstream path in favour of our

Package-Manager: portage-2.2.0_alpha180
The dependency of several packages on sci-libs/libxc modified to reflect correctly the recent change in the upgrade of sci-physics/abinit & friends.
Merge branch 'master' of git+ssh://git.overlays.gentoo.org/proj/sci

Looks like I have broken something. Conflicts are reported in sci-libs/libxc.
Trying desperately to recover.
sci-physics/openmx upgraded to 3.7.3 with some openMP and MPI C/F90 juggling, previous sci-physics/openmx-3.6 preserved for the time being.
big fixes of metadata and package sub-herd re-distribution