#2016 - fix another race condition

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20048 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - failed attempt to create a smaller failing test case

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20050 b5f69653-2bf5-0310-8201-b0dafb8e1405
Should provide #2324.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20053 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - fix another race condition

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20055 b5f69653-2bf5-0310-8201-b0dafb8e1405
Add a CITATION file (see http://software-carpentry.org/blog/2013/09/introducing-citation-files.html).

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20056 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - some tidying and a hack to get `TestArchiveFormat` to pass

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20060 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - do a proper out-of-source build, and thus avoid needing to copy test data

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20065 b5f69653-2bf5-0310-8201-b0dafb8e1405
This bit of r20060 breaks a profiling test. I hate archiving.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20068 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - it appears `CHASTE_CVODE` was not defined, so the build was not actually using CVODE...

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20077 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - add support for VTK, to be fully tested tonight!

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20078 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2012 Added method to remove a node form a `PottsMesh` 

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20080 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - fix error found with CVODE on, and sped up 2 tests which had a max dt of 0.0001 with CVODE!

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20082 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2381 Fix the behaviour when the HDF5 chunk size is 4GiB or more to reduce the time slices in the chunk.  Also fix "magic numbers" when chunk sizes are very low to avoid performance issues with small-mesh/many-timesteps.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20083 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2381 Fix zero size error in r20083

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20084 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2436 Added a `FibreConverter` which uses `FibreReader` and `FibreWriter` to convert fibre files from ascii to binary. This was tested in `TestFibreWriter` and used in `MeshConvert` to add fibre functionality.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20085 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - some tidying

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20088 b5f69653-2bf5-0310-8201-b0dafb8e1405
#1338 Attempt to speed up parallel assembly (distributed vector)

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20103 b5f69653-2bf5-0310-8201-b0dafb8e1405
#1338 Attempt to speed up parallel assembly (mechanics)

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20104 b5f69653-2bf5-0310-8201-b0dafb8e1405
Fix Intel build broken by Ozzy in r20080 (#2012).

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20107 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - LOCATION for a target is a bit more complicated than I thought...

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@20108 b5f69653-2bf5-0310-8201-b0dafb8e1405