Merge pull request #111 from andersje/master

prepended directory name to run.sh to allow install to proceed.
Correctly catch permission errors making biodata genome directory and use sudo when needed. Fixes #112
Support latest mutect release: chapmanb/bcbio-nextgen#40
add weblogo
Merge pull request #113 from tanglingfung/patch-1

add weblogo
Copy all the necessary files to run weblogo
Provide better defaults for build locations, install into /usr/local and /usr/local/share to avoid polluting /usr and to make non-path local installs more globally available
Merge #114
Add support for MacOX Homebrew (and Linuxbrew port) package manager. Provide preliminary framework for supporting MacOSX but needs testing and additional work
Merge branch 'master' of github.com:chapmanb/cloudbiolinux