Cleaned up mutation parts
Adjustments to updated mutation data set
Extended mutation data, switched back to external util module
Added label to mutation data, forgot about that
Added backbone dynamics (flex) as protein data source
Remove muttovec, just use mutvec and do not use fr feature
Also removed tomutvec from featext
Added mutation features using backbone dynamics and codon data
Updates to enable manual setting RBF parameters
Added cache_size default param for libsvm classification
Removed previous conservation data
Added msa to replace rank data
Added multiple sequence alignment with homologous (msa) property
Add msa based feature calculation methods
Adjusted msa variability to now msa data
Added msa variability function, pep8
Fixed bug in msa variability calculation
pep8
Cleaned and commented argparse code
Enable use of user defined parameters