Merge pull request #1040 from sbesson/10687_getannotations

Add functions to load annotations from their ID (#10687)
Merge pull request #1043 from snoopycrimecop/merge/dev_4_4/submodules

Update dev_4_4 submodules
Merge pull request #1022 from sbesson/10677_integergroupname

CLI: Improve group arguments allowing to specify input type (see #10677)
Fix find_user() method to deal with ambiguous groups

Add error_ambiguous_user() method
Improve user arguments allowing to specify input type (id or name)

Refactor list_users() methods to call find_user(), find_user_by_id() and/or
find_user_by_name() depending on the input.
Fix share display 'figScripts'. See #10733
Run Script from Basket/History/Search. See #10735
Delay refreshThumbnails() on omero_image.html save/reset. See PR 1036
Merge pull request #1027 from will-moore/web_resolutions_count_10681

Big Image levels=re.getResolutionLevels(). Fixes #10681
Merge pull request #1014 from sbesson/releasedoc_fix

Fix Sphinx documentation directory post doc reorganization
merge dev_4_4 -D org -I include -E exclude: PR 821 (Connection)
merge dev_4_4 -D org -I include -E exclude: PR 988 (webgallery prototype from github/will-moore/webgallery)
merge dev_4_4 -D org -I include -E exclude: PR 1002 (Thumbnail figure)
merge dev_4_4 -D org -I include -E exclude: PR 1033 (Download image and metadata)
merge dev_4_4 -D org -I include -E exclude: PR 1036 (Copy paste rdefs 10673)
merge dev_4_4 -D org -I include -E exclude: PR 1045 (OMERO.matlab: add permissions to the object loading methods)
merge dev_4_4 -D org -I include -E exclude: PR 1050 (Import archived)
merge dev_4_4 -D org -I include -E exclude: PR 1053 (CLI: Improve user arguments allowing to specify input type)
merge dev_4_4 -D org -I include -E exclude: PR 1054 (Web bugs april17th)
merge dev_4_4 -D org -I include -E exclude

Repository: openmicroscopy/openmicroscopy
Already up-to-date.
Merged PRs:
  # PR 821 jburel 'Connection'
  # PR 988 will-moore 'webgallery prototype from github/will-moore/webgallery'
  # PR 1002 will-moore 'Thumbnail figure'
  # PR 1033 jburel 'Download image and metadata'
  # PR 1036 will-moore 'Copy paste rdefs 10673'
  # PR 1045 sbesson 'OMERO.matlab: add permissions to the object loading methods'
  # PR 1050 jburel 'Import archived'
  # PR 1053 sbesson 'CLI: Improve user arguments allowing to specify input type'
  # PR 1054 will-moore 'Web bugs april17th'

Repository: openmicroscopy/bioformats
Already up-to-date.
Merged PRs:
  # PR 379 sbesson 'Fix source code links moved to the scifio-tools foder'
  # PR 460 rleigh-dundee 'ZeissLSMReader: Correct ROI indexing and metadata store call ordering'
  # PR 462 knabar 'Add features to Deltavision interface'
  # PR 464 sbesson 'bfGetReader() unit tests'

Repository: ome/scripts
Already up-to-date.
Merged PRs:
  # PR 27 will-moore 'Group thumbs by tag (only show each thumb once)'

Repository: openmicroscopy/ome-documentation
Already up-to-date.
Merged PRs:
  # PR 281 sbesson 'Review Matlab documentation (see #10389)'
  # PR 334 sbesson 'Add GH/Jenkins extlinks to the model documentation'

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