Added callback function to output query header.
Extended the sequence header callback fun. by querylength.
Added function to compute MUMs based on suffix arrays.
Eliminated querydescription as part of querymatch.
Rename gt_querymatch_len to gt_querymatch_querylen
Renamed types and functions for MMsearchiterator.
Cleanup Enum, so that the header files are accepted by clang++
Removed unnecessary argument in gt_callenumquerymatches
adjusted headers of unique and substring match.
Renmaing and adjustment of Interface for matching funcs.
Add check uf queryrep != NULL
Added comment to score/edist, changed order of adds/
Renamed Querymatch -> GtQuerymatch
Add comment on semantics of GtQuerymatch components.
In querymatch not more query sequence and totallength
Adapt function name.
Use callback functions for the two matchers.
Added method for finding lcpintervals using characterwise refinements.
Corrected computation of match length.