1.0.0
- moved lots of code from pwbc into microarrays
- moved code from pwbc -> microarrays -> mjcaffy
- TODO: move code into mjcagilent, mjcillumina
- TODO: reduce the number of dependencies
- TODO: specific @importFrom, rather than @imports pwbc mjcgraphics mjcbase
1.0.0
- moved lots of code from pwbc -> microarrays
- moved affymetrix-specific code to mjcaffy
moved to mjcbase
moved to metaGSEA
moved to mjcaffy
refactored plot.CAT -> catplot
deleted because the code was just that from sort-methods.R. This code MAY have gone missing somewhere
new
new
new
moved back to pwbc
bug fix where controlData column names could get mangled
bug fix: wasn't working when na.rm=TRUE
added roxexample
refactor str.left -> str_left
use mjcgraphics::qvalue2
roxygen
roxygen
roxygenized
refactored the calls to: p() -> paste0()
moved S4 sort methods on matrix or data.frame to mjcbase. leave the Bio-specific methods here.
roxygenized S3 hack