copied improved dup row deletion from bulk_create... to _get()
added more temp debugging lines, and fixed end_it_all() so that it does not kill and reset the job; also corrected output of SIG death explanation
added some temp debugging warnings
improved setup completion email; close_to_time_limit() call is now given a sensible arg for short jobs; fixed issues in submission handling when state of our sub/job is changed by another process
no longer asks questions where there is only one possible answer; now asks about transferring metadata from inputs to outputs
we now loop through all elements, so some may be incomplete - skip steps in that case
you must use Pipeline->create, not get()
added basic little script to list out how VRPipe is using disk at a given location; to be improved with more options and increased speed
copy() and move() now check the destination filesystem has sufficient space before proceeding, throwing if not
when doing start_from_scratch(), we now delete the stepstates if the had same_submissions_as set, to avoid problems with what they point to also being started over or deleted
ensure that pipelines get constructed so this works on fresh databases
suggest a default port that is random, so multiple installs running on the same machine will not conflict
enable install_pipelines_and_steps() call in production mode
removed force_when_testing debugging options
bump minimum memory when submitting a Runner to 500MB; we still need to profile and then bring this number down
removed debugging lines
removed debugging lines
improved error message on failure to submit
improved handling when farm_server goes away
removed debugging lines