Merge pull request #6 from EcoForecast/master

update
Merge pull request #7 from EcoForecast/master

high level outline
Merge pull request #8 from EcoForecast/master

h
Merge pull request #8 from EcoForecast/master

merge changes from Saturday meeting
Merge pull request #26 from dgianotti/master

Minor changes to RunJAGS.R (2:n -> 1:n...)
Merge pull request #9 from EcoForecast/master

merge dan and josh changes
Merge pull request #27 from dgianotti/master

Fixed some bugs??
Merge pull request #10 from EcoForecast/master

fixed bugs?
Merge pull request #28 from dgianotti/master

Updates to RunJAGS.R, run.SS.model.R.
Merge pull request #9 from EcoForecast/master

update
Merge pull request #29 from dgianotti/master

Updated run.SS.model and make.SS.plots. Both are now fully operational! ...
create FM model
bugs
Merge pull request #30 from HollieEmery/master

forecast model progress
loaded output from state space model to use in particle filter
function for the first part of Step 2 of the Operations script
Merge pull request #11 from EcoForecast/master

update
save output from forecast model, fixed bugs in forecast model, updated some ancillary functions for Operations script
adding files from Hollie (conflicted with previous changes)
update r