Added scripts used to annotate the genomes.
Initial project setup.
Barcode matching works with assumptions.

Assume that r1 always has the MLV/HIV sequene and R2 always has
the adapter sequence. That is not always true though.
Writes barcodes out to appropriate files.
Functional but slow.
Added reworked version of Emmanuel's pathway script.

Thanks to Emmanuel Dimont.
Added barcode splitter.