Reducing memory footprint on large BAM files by periodically halving the list we save. Making the u4mSize be a command line option instead of always 4 million.
Automatic retrier works in a basic sense.
Automatic retrier works in a basic sense.
Making it not add jobs that failed multiple time more than onece.  Making it not add a failed job when replacement is in progress.
Moving jobResult to lib directory so it can be shared.
Removing some debugging and adding commented out pseudocode.
Fixing bug that occurred in small minority of files.
Moving a couple of routines to library so they can be shared.
Adding -wait option to parasol add job to wait for job to finish.
Reducing verbosity of waiting message.
Changing ownership of batch file to job owner.
Fixing a divide by zero in mapRatio.  Making it warn rather than about on rcc and idat files.
Changing daemon in two big ways - making it so it just takes one job at a time from the database, and so that it will do a bursty retry attempt to keep alive through missed database connections without flooding logs.
Adding pid field to job tables.
Forking off a new daemon, edwAnalysisJob, intended to run longer lasting things via parasol.
Upgrading to version 4, see comments top of file for details.
Merge branch 'master' of hgwdev.cse.ucsc.edu:/data/git/kent
Merge remote-tracking branch: upstream/master