Merge branch 'sorting-shell-script'
Merge branch 'sorting-shell-script'
made the file more generic
The start of a series of preparation steps to precede running blastn or tblastn.
Merge branch 'juliema'
added status log lines.
search for paired seqs in fasta files
edits
chomp
removed test print
now takes blast output directly and sorts it.
move line
trying to debug awk
make sure names are unique.
moved order of entries for easier repeating.
bug fixes
don't keep around empty lines.
test of pipeline with multiple iterations
adding status messages.
oops, forgot $