#2016 - various fixes for Windows build/tests

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19372 b5f69653-2bf5-0310-8201-b0dafb8e1405
#1157 Added data (Attribute tag) hooks to `Hdf5ToXdmfConverter`. Also added timestep data to the writer. Only works in serial.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19373 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2407 - add class `CellBetaCateninWriter` and use this in `CryptSimulation2d`

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19380 b5f69653-2bf5-0310-8201-b0dafb8e1405
For #2390, allow use of the line_profiler Python module in a `LineProfile` build.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19389 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349-related Unused private member.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19392 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349 Correct r18160, r18161, r18162, r18182, r18183  wrt comments in the ticket

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19394 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349 Get most core and cell_based components to build.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19395 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349 Remove GNU static initializer

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19396 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - revert part of r19372 that caused parallel deadlock.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19397 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2370 fix memory test

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19402 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349 Fix some compilation issues (including CVODE)

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19412 b5f69653-2bf5-0310-8201-b0dafb8e1405


git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19417 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2016 - a better solution than r19372 to allowing use of MPI_Wtime in sequential tests.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19419 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2409 and #1492 change old-fashion time to use wall-clock

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19420 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2409 and #1492 change old-fashion time to use wall-clock (as a double this time!)

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19421 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2349 - don't build test libraries if they don't have any source files, to avoid error from Mac ar

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19422 b5f69653-2bf5-0310-8201-b0dafb8e1405
#2409 Correct r19421 because it's dangerous to use MPI calls in a statically instantiated class (because it's instantiated before `MPI_Init()`).

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19423 b5f69653-2bf5-0310-8201-b0dafb8e1405
Avoid extra test re-running caused by r19160 adding the SCons environment as
an attribute on build objects.

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19426 b5f69653-2bf5-0310-8201-b0dafb8e1405
#1157 - fix Windows build again

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19427 b5f69653-2bf5-0310-8201-b0dafb8e1405
Small note on documentation

git-svn-id: https://chaste.cs.ox.ac.uk/svn/chaste/trunk@19431 b5f69653-2bf5-0310-8201-b0dafb8e1405