Merge pull request #53 from TotteKarlsson/weekend_docs

Weekend docs
Merge pull request #54 from TotteKarlsson/weekend_docs

Weekend docs
udated copyright info
Merge pull request #55 from TotteKarlsson/weekend_docs

Fixed -o flag in rr application
ran OSX tests
added notices for libxml2, libiconv, zlib, libbzip2
Merge branch 'totte-weekend_docs' into docs_run
path for core c api docs output updated
Merge branch 'totte-weekend_docs' into docs_run

Conflicts:
	wrappers/C/core_c_api.doxy
bumped version numbers in docs to 1.0.0 for the release
top level index.html - updated with relative links for distribution with binary so it works on local systems
add __declspec to libSBML class to allow dynamic linking on Windows, ran tests
Merge pull request #56 from TotteKarlsson/weekend_docs

Cleaned up what gets installed in the python folder.
Merge branch 'docs_run' of https://github.com/mgaldzic/roadrunner into mgaldzic-docs_run
Removed lmfit from third parties
Added installation of Plugin headers.
PluginLib heades are now installed in pluginslib/c and pluginslib/cpp
Added a BUILD_TEST_TOOLS target, keeping the BUILD_TESTS target.
Build only cxx test app and rrc if BUILD_TEST_TOOLS are selected
Don't install the test scripts..
Removed .lib files from plugin install
Added files that will over write files from the libSBML install
Added Copying.txt file