Initial directory structure.

git-svn-id: http://bedops.googlecode.com/svn/trunk@1 e06f2406-07f2-75ea-cce5-9db217a01b16
initial load

git-svn-id: http://bedops.googlecode.com/svn/trunk@2 e06f2406-07f2-75ea-cce5-9db217a01b16
added bbms.csh

git-svn-id: http://bedops.googlecode.com/svn/trunk@3 e06f2406-07f2-75ea-cce5-9db217a01b16
updated make to include bbms

git-svn-id: http://bedops.googlecode.com/svn/trunk@4 e06f2406-07f2-75ea-cce5-9db217a01b16
files not needed

git-svn-id: http://bedops.googlecode.com/svn/trunk@5 e06f2406-07f2-75ea-cce5-9db217a01b16
moved BEDOPS application make file to top level

git-svn-id: http://bedops.googlecode.com/svn/trunk@6 e06f2406-07f2-75ea-cce5-9db217a01b16
make clean is less aggressive, cleaning only programs in BEDOPS

git-svn-id: http://bedops.googlecode.com/svn/trunk@7 e06f2406-07f2-75ea-cce5-9db217a01b16
removed -s flag during compilation

git-svn-id: http://bedops.googlecode.com/svn/trunk@8 e06f2406-07f2-75ea-cce5-9db217a01b16
update make files to work with mac os x and linux with -static -s alternatives

git-svn-id: http://bedops.googlecode.com/svn/trunk@9 e06f2406-07f2-75ea-cce5-9db217a01b16
wrong var in makefile

git-svn-id: http://bedops.googlecode.com/svn/trunk@10 e06f2406-07f2-75ea-cce5-9db217a01b16
need export statement for parent/child relationship in make to work on mac ppc

git-svn-id: http://bedops.googlecode.com/svn/trunk@11 e06f2406-07f2-75ea-cce5-9db217a01b16
need export statement for parent/child relationship in make to work on mac ppc

git-svn-id: http://bedops.googlecode.com/svn/trunk@12 e06f2406-07f2-75ea-cce5-9db217a01b16
simple updates to make files

git-svn-id: http://bedops.googlecode.com/svn/trunk@13 e06f2406-07f2-75ea-cce5-9db217a01b16
simple code factoring

git-svn-id: http://bedops.googlecode.com/svn/trunk@14 e06f2406-07f2-75ea-cce5-9db217a01b16
adding boost headers to simply builds

git-svn-id: http://bedops.googlecode.com/svn/trunk@16 e06f2406-07f2-75ea-cce5-9db217a01b16
updating make system again to accommodate a local version of boost headers

git-svn-id: http://bedops.googlecode.com/svn/trunk@17 e06f2406-07f2-75ea-cce5-9db217a01b16
removed symlink from make system

git-svn-id: http://bedops.googlecode.com/svn/trunk@18 e06f2406-07f2-75ea-cce5-9db217a01b16
updated make for typical make && make install

git-svn-id: http://bedops.googlecode.com/svn/trunk@19 e06f2406-07f2-75ea-cce5-9db217a01b16
removed {gnu coreutils}-dependent -d option from split call in bbms

git-svn-id: http://bedops.googlecode.com/svn/trunk@34 e06f2406-07f2-75ea-cce5-9db217a01b16
included a readme document: install.readme that says to use 'make and make install'

git-svn-id: http://bedops.googlecode.com/svn/trunk@35 e06f2406-07f2-75ea-cce5-9db217a01b16