fix issues with molgenis header 590,586; added tests; change help exit; etc.
removed line
Merge pull request #596 from georgebyelas/master

	fix issues with molgenis header 590,586; added tests; change help exit; code refactoring all around
fixed the tests
name of ontology need to be specified before indexing
finished the matcher and annotator
restrict the search to only using name of data items
added a new plugin
added two QueryRules for elasticsearch
Merge branch 'master' of https://github.com/molgenis/molgenis into work