First commit of the Matlab Colony Analyzer Toolkit.
Finished first implementation of threshold estimation using object-oriented programming.
new threshold functions, and other changes.
It's been a while...
fast local trheshold added. Pre-restructuring.
full-plate thresholding in place. some kinks in png file handling identified - see next commit for solution.
New plate loading paradigm (using objects).
Load plate functionality now in object-oriented/closure style.
more dimension and spacing improvements. Now I'm going to tackle non-crop-dedendent grid fitting.
min_frequency threshold added. auto_grid added. new measure_colony_offset.
background_offset added. Minor changes made to anlayze_image and auto_grid, as well as the io functions.
Merge branch 'master' of github.com:brazilbean/Matlab-Colony-Analyzer-Toolkit