Homer chipseq mod added
Merge branch 'master' into homer_chipseq
Merge branch 'readhandling' into homer_chipseq

Conflicts:
	mods/bowtie.sh
read indicator handling adjusted
read indicator handling adjusted 2
adjusting default resources
allows to focus on only cis or trans interactions
Output significant interactions wrt requested interaction mode
Merge branch 'master' into homer_hic

Conflicts:
	mods/hicHomer.sh
(optional) bigwig generation added
Fragment length parameterized
sampleconfig adjusted
Merge branch 'homer_chipseq' of github.com:Gurado/ngsane into homer_chipseq
bugfix stats calculation, bigwig generation
bigwig file generation refined
bugfix checklists
peakranger mod added
peakranger summary added
homer chipseq summary added
Merge branch 'master' into homer_chipseq

Conflicts:
	mods/bowtie.sh
	mods/bowtie2.sh