add numerical stability to VectorD::get_unit_vector() - if vector is tiny, will return a random unit vector (alternative would have been trying to magnify it recursively, but discarded to avoid unpredicted behavior) ; appropriate test was added for VectorKD instance

git-svn-id: https://svn.salilab.org/imp/trunk@15507 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
limit the number of displayed profiles/structures

git-svn-id: https://svn.salilab.org/imp/trunk@15508 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Fix spelling.


git-svn-id: https://svn.salilab.org/imp/trunk@15509 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Document construction from Transformation3D.


git-svn-id: https://svn.salilab.org/imp/trunk@15510 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add show all/hide all button

git-svn-id: https://svn.salilab.org/imp/trunk@15512 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Allow module C++ coverage to be affected by running tests for other modules.


git-svn-id: https://svn.salilab.org/imp/trunk@15513 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
clean up versions

git-svn-id: https://svn.salilab.org/imp/trunk@15514 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
test that internal coordinate access is special cases properly

git-svn-id: https://svn.salilab.org/imp/trunk@15515 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
provide method to return internal coordinate keys

git-svn-id: https://svn.salilab.org/imp/trunk@15516 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add comment

git-svn-id: https://svn.salilab.org/imp/trunk@15517 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
fix handling of internal coordinates

git-svn-id: https://svn.salilab.org/imp/trunk@15518 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
provide warning that a move is dropped

git-svn-id: https://svn.salilab.org/imp/trunk@15519 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
test movers on internal coordintes

git-svn-id: https://svn.salilab.org/imp/trunk@15520 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add more tests

git-svn-id: https://svn.salilab.org/imp/trunk@15522 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Clarify documenation of ReferenceFrame3D + minor update to VectorD::get_unit_vector()

git-svn-id: https://svn.salilab.org/imp/trunk@15524 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Fix spelling, again.


git-svn-id: https://svn.salilab.org/imp/trunk@15525 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Since trying to cover globally does not scale, group together only modules that
test each other.


git-svn-id: https://svn.salilab.org/imp/trunk@15526 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Add a brief description of code coverage.


git-svn-id: https://svn.salilab.org/imp/trunk@15527 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
Don't give lcov empty .info files.


git-svn-id: https://svn.salilab.org/imp/trunk@15529 e91f8c7b-0e32-4433-a9ac-4502d39a4eab
add a program to compute chi score between two profiles

git-svn-id: https://svn.salilab.org/imp/trunk@15531 e91f8c7b-0e32-4433-a9ac-4502d39a4eab