pathed score function and paired to fix issue with fasta reads with no qualities
bumped version number to 1.7.1
Fixed typo
fixed issue with space in empty qualities
added workaround for gem-2-gem and qualities
added base counting to gtf gene counts
Fixed float param option for exon overlap
Fixed custom output folder for compute transcriptome
fixed issue with single end reads and ID cleanup (#9)
updated readme
added coverage stats calculation to gtfstats run in rnaseq pipeline
bumped version
Merge branch 'v1.7.1'
bumperd download link in readme