valout.f with binary output copied from rjl-omp-tests branch, but with bugs when outaux==True
simple bug fix for counting larger than kind 1
Improved flagregions as flagregions2 - loop over regions
fixed binary output of aux arrays
test swirl with new regions
increased max1d for tsunami problem
Temporary fix to colate2 due to integer overflow with 7 levels
Merge pull request #32 from mjberger/master

trimbd bug fix
Merge remote-tracking branch 'upstream/master' into regions

* upstream/master:
  simple bug fix for counting larger than kind 1
changed length of rstfile variable for full path cases
Merged mjberger/regions into rjleveque/regions
Fixes to make restart run in geoclaw and a Richardson fix
bug fixes
fixed merge conflictts