made small corrections to error printing and type safety
Merge branch 'dev' of https://github.com/YeoLab/clipper into dev
fixed bionm slow running errors
fixed some tests / made tests more general
fixed merge issues
fixed more tests
Gaussian MM edge-finding works (somewhat) now
Gaussian MM edge-finding works (somewhat) now
Merge branch 'dev' of github.com:YeoLab/clipper into dev
reverted a change
added new hg19 as structure file based off of gencode gene annotations
removed some prining code
Merge branch 'dev' of https://github.com/YeoLab/clipper into dev
added updated mouse gene annotations
Merge branch 'dev' of https://github.com/YeoLab/clipper into dev
fixed transcript id calling to work with gencode genes
Merge branch 'dev' of https://github.com/YeoLab/clipper into dev
updated mm9 to be proper reference annotation
Merge branch 'dev' of https://github.com/YeoLab/clipper into dev
fixed issues with clip_analysis and updated scripts to use gencode gene annotations