added Dvir, Dmel and Dyak
Teach CMTKJacobian to cope with concatenation of >1 registration

e.g. for concatenating bridging registration
this generates the tvals needed to make an isosurface representation of male-enlarged regions in Amira
this script calculates the volumes of different neuropil regions (defined by the FBIS1_JFRC2 mask) and the jacobians volumes of Dvir and Dsim respectively
zap non finite values in nrrd
no change made
image processing backup
split from RunPipeline: run Figures
this script accesses the JFRC materials
Merge branch 'master' of github.com:jefferis/DrosophilidDBM

Remove merge conflict markers (which Lea had commented out)

Conflicts:
	R/ImageProcessingFunctions.R