Added missing Makefile
Fixed bugs relating to running noVNC (added Makefile commands to install it) and dealing with the different arguments hostname may accept
Fixed bugs:
- gdbLineNum.pl was not being made
- there was a hardwired path in mfemwrap.cgi
- removed repeated appending to LD_LIBRARY_PATH and printing of environment from maximizeWindow.pl
Fixes to make directory names correct and make clean remove all intermediate files
Starting work on trace heatmaps
Basic functionality for heatmaps wirk links is working. Remains: support for high-level scopes and tracing
Finished basic trace heatmaps with links
Working more on heatmap
heatmap traces working correctly
Merged source with other variants of dbglog that had some improvements such as the addition of boxplot traces and fixing of bugs in vnc support.
Box plots are functional
Fixed bad path for xdotool
fixed dependency
Fixing bad comment that removed gdb support

Adding a dependency to the Makefile to ensure everything is compiled for targets allExamples and runExamples
Merge branch 'layersDevelop' of https://github.com/bronevet/sight

Conflicts:
	Makefile
	apps/mcbench/src/MCBenchmark.exe
	apps/mfem/Makefile
	apps/mfem/maximizeWindow.pl
	apps/mfem/mfemwrap.cgi
	attributes.C
	maximizeWindow.pl
	script/core.js
	sight_layout.C
	sight_layout_internal.h
	widgets/Makefile_pre
	widgets/graph_layout.C
	widgets/scope_layout.C
	widgets/trace.C
	widgets/trace.h
Merge branch 'layersDevelop' of https://github.com/bronevet/sight
Restructured slayout is working